Tuesday, July 23, 2013
Ivan Flores Blog 2
Research has been going well so far. I am continuing to
trouble shoot my cell culturing experiments by collecting cells on coverslips
at different time points to be assayed for differentiation. At the same time, I
have also begun to study the effect that IL-10 has on the transcription factor
MyoD on quadricep muscle in vivo. This approach comes from qPCR data showing
that MyoD is upregulated in IL-10 treated mice. Hopefully, everything goes well
and the data I collect shows positive results. Other than research, I am still
studying for the GRE and become more inspired to be accepted to graduate
school. The mentoring on personal statement writing and advice that is given at
the seminars greatly help with planning for graduate school early on.
Brian Perez Blog 2
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Just hanging out by one of the many Stanford fountains |
This last
weekend I also celebrated my birthday. I was fortunate enough that my family came
to visit me all the way from Riverside. It was great to see my family again. We
spent the day touring Stanford’s campus and then went to check out the
Golden Gate Bridge at San Francisco.
Brian Perez Blog 1
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At the Oval, Stanford Univ. |
I feel like I am going to learn a lot from this summer in the lab doing research and also about improving my professional skills. I am working in a lab that works with proteins and making peptides for pharmaceutical purposes. My project specifically focuses on new drug discovery aimed at protecting heart tissue during a heart attack. I am also going to be learning many new techniques that I am not familiar with that are essential in almost every lab like Western blots and cell culturing techniques. I have also been giving the opportunity to set up protocols for new experiments that the lab does not do, so the experience will be interesting since no one here really knows what to expect.
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Some of my new friends on a tour of Stanford Univ. |
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Hanging out at San Francisco by the ocean! |
Richard Flores Blog 2
Oh science....this week made me think of a quote I was told
by my up and coming scientist buddy Jamie, it goes: “Science-if your experiment
works the first time around, you’re not doing it right.” That sums up my week.
I spend an entire week writing and testing the protocol for my experiment,
Novel Object Recognition. It has never been done by anyone in my lab so I’m in
charge of figuring it out. I was careful to make sure I had everything perfect.
Finally, after a week of preparations, I did my first ‘real’
test in which I would actually collect
data. Of course, it did not go as planned. The camera was having difficulty
tracking the mice, the mice were running around as if they had never seen the
arena (completely ignoring the objects), and the software was switching around
parameters at random. Thus, I’ve spent this week reviewing my protocol with a
fine toothed comb. Even though I was very distraught at my failed experiment, I
remain optimistic that when I re-test it on Saturday, everything will go according
to plan!
Ivan Flores Blog 1
My summer research has had a great start. This summer I am staying in
my regular lab, working on getting more data for my research. Currently, I am
in the middle of trouble shooting a few techniques that will be necessary for
me to complete the in vitro portions of my project. The trouble shooting has
been fun so far, since I have had to learn new techniques. These techniques
include culturing cells on cover slips as well as collecting cells for creating
kinase assays. Apart from doing research, I have also started taking GRE
preparation classes. The classes add a new and fun challenge to balancing my
time this summer. I have met new friends in the class, making it more enticing
to attend each class. Hopefully the summer will continue being as great as it is
now. Obtaining good results and doing well on the GRE exam will make the work
thus far worth it.
Walter Hardesty Blog 1
Hey everybody!
Here’s what the assay looks like for a plate inoculated with
cells and incubated at atmospheric levels of carbon dioxide:
My name is Walter Hardesty and I am beginning
my fourth-year as an MIMG major. I’m one of the new MARCers, and am excited for
a productive summer of research in Dr. Kent Hill’s Lab who works with Trypanosoma brucei. For those of you who
are curious, T. brucei is a
unicellular, eukaryotic parasite that causes a devastating disease in humans
called African Sleeping Sickness. My work has been centered on a protein called
carbonic anhydrase and its role in social motility. I am investigating its role
by performing social motility assays on carbonic anhydrase knockdown lines at
different levels of carbon dioxide, and seeing what happens!
How cool is that! Anyway, that’s just a taste of the work I
will be doing this summer in the Hill Lab. Besides lab work, I’m also having a
great time working with the other graduate students and post docs. My mentor,
Edwin Saada, is great. He always pays close attention to my work in the lab in
an effort to guide me on my path. I can’t wait until he teaches me a new
technique in the lab called immunofluorescence!
Dr. Kent Hill is also terrific! He’s in his office in the
lab nearly 3-4 times a week, which is a whopping amount of time (compared to
what I’ve heard about other P.I.’s). We have meetings once in a while where he
provides me with direction in my project. All in all, his help and support are
excessive, and it feels great to know that I am at the forefront of science,
alongside one of the leading scientists in trypanosome biology!
Until next
time, later guys!
Here’s me at the lab! Keepin’ it reallllllll.
Julio Silva Blog 1
Hi everyone!
My name is Julio Silva. I’m a Biochemistry major and I’ll be
starting my senior year and my second year of MARC this coming fall at UCLA. Like
other MARC-ers, I am also in Cambridge/Boston, MA under the Howard Hughes
Medical Institute (HHMI) Exceptional Research Opportunities Program (EXROP).
This week will mark the fifth week of my summer experience and I must say that it has so far been scientific heaven! I am doing HIV research at the Ragon Institute of Massachusetts General Hospital (MGH), MIT and Harvard. The institute is a collaborative partnership between these three institutions and does cutting edge HIV research with the goal of effectively eradicating the AIDS epidemic. I’m doing my research in Dr. Bruce Walker’s lab, director of the Ragon Institute. My project is on the role of miRNAs during acute HIV infection, particularly their role in causing large bystander CD4T-cell (the target white blood cell of HIV) depletion. I’m learning a lot of cool techniques, like flow cytometry and many miRNA-based techniques and I’m working with fresh human tissue that is sent to us straight from MGH! My results have so far been promising and my experience in general is amazing! The collaboration between these institutions and from the people that work here is one of the things that make this place so great. It’s like a giant team effort that comes from several arms to reach an ultimately unifying goal. The type of work that gets done here, even my own work, could not get done so efficiently if this type of collaboration did not exist. My direct mentor, Dr. Juan Cubillos, too has taught me so much within these four weeks and has given me an enormous amount of his time. I am very grateful to have him.
Well, time to get back to figuring out why I suddenly got an increased amount of CD4 T-cells nine days after infection compared to day 3…. I think I must have gated wrong the first time… :(
This week will mark the fifth week of my summer experience and I must say that it has so far been scientific heaven! I am doing HIV research at the Ragon Institute of Massachusetts General Hospital (MGH), MIT and Harvard. The institute is a collaborative partnership between these three institutions and does cutting edge HIV research with the goal of effectively eradicating the AIDS epidemic. I’m doing my research in Dr. Bruce Walker’s lab, director of the Ragon Institute. My project is on the role of miRNAs during acute HIV infection, particularly their role in causing large bystander CD4T-cell (the target white blood cell of HIV) depletion. I’m learning a lot of cool techniques, like flow cytometry and many miRNA-based techniques and I’m working with fresh human tissue that is sent to us straight from MGH! My results have so far been promising and my experience in general is amazing! The collaboration between these institutions and from the people that work here is one of the things that make this place so great. It’s like a giant team effort that comes from several arms to reach an ultimately unifying goal. The type of work that gets done here, even my own work, could not get done so efficiently if this type of collaboration did not exist. My direct mentor, Dr. Juan Cubillos, too has taught me so much within these four weeks and has given me an enormous amount of his time. I am very grateful to have him.
I’ve also had the opportunity to go on rounds with Dr.
Walker at MGH and I was able to see some amazing cases and even rare diseases
like Gorham’s disease, a vanishing bone disease. He treated me like a med student and he
taught me some valuable, essential information about what it means to be a
doctor. His patients love him because he profoundly cares about them. He goes
on several trips to South Africa as well every year and I casually mentioned my
interest in going there perhaps for next summer…. We’ll see how this turns out
:)
Well, time to get back to figuring out why I suddenly got an increased amount of CD4 T-cells nine days after infection compared to day 3…. I think I must have gated wrong the first time… :(
I’ll share more soon!
Julio
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